scripps.vvm.schemes
Class ResidueColor_BySSType

java.lang.Object
  |
  +--harmonic.mz.data.ModelNode
        |
        +--scripps.vvm.schemes.Scheme
              |
              +--scripps.vvm.schemes.ResidueColorScheme
                    |
                    +--scripps.vvm.schemes.ResidueColor_BySSType
All Implemented Interfaces:
java.awt.event.ActionListener, harmonic.mz.data.DataNode, harmonic.mz.gui.Documentable, java.util.EventListener, harmonic.mz.data.Interpolater, harmonic.meshGeom.math.MarkableObject, harmonic.mz.event.NodeListener

public class ResidueColor_BySSType
extends ResidueColorScheme


Field Summary
 harmonic.mz.data.fields.ColorField def
           
 harmonic.mz.data.fields.ColorField helix
           
 harmonic.mz.data.fields.ColorField loop
           
 harmonic.mz.data.fields.ColorField strand
           
 harmonic.mz.data.fields.ColorField turn
           
 
Fields inherited from class harmonic.mz.data.ModelNode
_fileRoot_, _thread_, ATTRIB_CONTROL_WIDGET, ATTRIB_LISTABLE, ATTRIB_PRESENTABLE, ATTRIB_PRIVATE, ATTRIB_REMOVEABLE, ATTRIB_RENAMEABLE, ATTRIB_SHOW_CONTEXT_MENU, ATTRIB_TYPE_FILTER, ATTRIB_USERGROUP, ATTRIB_VALUE_GROUP, ATTRIB_VE_LISTENER, bCustomCS, bDebug, bValid, name
 
Constructor Summary
ResidueColor_BySSType(VVM_RepShape shape)
           
 
Method Summary
 harmonic.mz.data.fields.ColorField addAA(java.lang.String name, harmonic.meshGeom.math.Clr3f clr)
           
 java.lang.Object getValue(java.lang.Object _residue, java.lang.Object data)
           
 
Methods inherited from class scripps.vvm.schemes.Scheme
nodeChanged
 
Methods inherited from class harmonic.mz.data.ModelNode
actionPerformed, addAll, addAlphaed, addField, addField, addField, addFields, addNetworkInput, addNetworkOutput, addNode, addNodeListener, addNodeListener, addNodes, addNodes, addToCurrent, addToGlobals, addToNetworkEditor, addToTemps, addWithUndo, allFieldsAreFinal, applyDataTransfer, areFieldsValid, assignFromMetaFields, assignFromXMLAttributes, assignFromXMLString, assignToMetaFields, assignToXMLAttributes, assignToXMLString, at, bind, canSelect, castSelection, checkFileRead, checkNetworkInput, childCount, clean, clearAttrib, clearNotified, compare, copyFrom, createControlWidget, createCopy, createXMLElement, deepCopy, defeatNodeEvents, disableEvents, enableEvents, expectedValidationTime, fileRoot, finalize, findFieldElement, findNode, fromXMLNodes, getAttrib, getBound, getCatagory, getControlWidget, getCurrentNames, getDataTransfer, getDataTransferTypes, getDeleted, getDirectInputs, getDirectOutputs, getEffectors, getEntryListener, getErrorState, getFilterType, getFullName, getHandles, getInstanceURL, getInterpolater, getIsLeaf, getListable, getMark, getMetaFields, getName, getNodeChildren_V, getNodeChildren, getNodeID, getNodeParent, getObjectRep, getPresentable, getPrivate, getReferencePoolName, getRemoteOwner, getRemoveable, getRenameable, getSaveable, getSavedChildren, getSelect, getSeparateDirectInputs, getSeparateDirectOutputs, getSequenced, getSerialNo, getTags, getTentativeSelect, getTransformable, getTransformableParent, getTransient, getTreeName, getTypeImage, getTypeURL, getUnfoldedChildren, getUpdateTime, getUserGroup, getValidates, getValue, getXMLNodes, hasDependants, hasExternalRef, hashKey, hasValidationLock, hideControlWidget, indexOf, initControlWidget, insertNode, interpolate_Linear, interpolate_Quadratic, invalidate, isField, isFinal, isInSubtree, isInTree, isLinked, isNotified, isPurged, isSet, isTemporary, isValid, linkedTo, linksChildren, makeContextMenu, makeFixed, makePrototype, makeReferenced, makeUnreferenced, makeVisibleInGUI, markNotified, mayValidate, notifyListeners, postAssignFromXMLElement, preAssignToXMLElement, printChildren, printTags, printTree, printTree, purge, purgeFinal, pythonString, remove, removeAll, removeAll, removeHandles, removeNetworkInput, removeNetworkOutput, removeNode, removeNode, removeNode, removeNodeListener, replace, selfNodeChanged, set, setActualName, setAttrib, setBound, setCatagory, setChildrenExcept, setCoordSystem, setCurrentControlWidget, setCurrentNames, setDeleted, setEntryListener, setErrorState, setFromPrototype, setIsField, setIsLeaf, setIsSet, setListable, setMark, setMetaFields, setName, setNodeParent, setPresentable, setPrivate, setRemoteOwner, setRemoveable, setRenameable, setSaveable, setSelect, setSelect, setSequenced, setSerialNo, setTentativeSelect, setTentativeSelect, setToLink, setTransient, setTransientChildren, setUpdateTime, setUserGroup, setValidates, setValidationLock, setValue, setValueGroup, showControlWidget, showControlWidget, showControlWidget, showHandles, startRename, tag, toString, unlinkListeners, unmarkNotified, untag, updateBindable, valChanged, valChanged, validate, valueString
 
Methods inherited from class java.lang.Object
clone, equals, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Field Detail

helix

public harmonic.mz.data.fields.ColorField helix

strand

public harmonic.mz.data.fields.ColorField strand

turn

public harmonic.mz.data.fields.ColorField turn

loop

public harmonic.mz.data.fields.ColorField loop

def

public harmonic.mz.data.fields.ColorField def
Constructor Detail

ResidueColor_BySSType

public ResidueColor_BySSType(VVM_RepShape shape)
Method Detail

addAA

public harmonic.mz.data.fields.ColorField addAA(java.lang.String name,
                                                harmonic.meshGeom.math.Clr3f clr)

getValue

public java.lang.Object getValue(java.lang.Object _residue,
                                 java.lang.Object data)
Specified by:
getValue in class Scheme