scripps.mol_data
Class Bond

java.lang.Object
  |
  +--harmonic.mz.data.SimpleNode
        |
        +--scripps.mol_data.MolElement
              |
              +--scripps.mol_data.Bond

All Implemented Interfaces:

harmonic.mz.data.DataNode, harmonic.meshGeom.math.MarkableObject

public class Bond

extends MolElement

Field Summary

Fields inherited from class scripps.mol_data.MolElement

hashIndex

Constructor Summary

Bond()

Bond(Atom atom1, Atom atom2)

Method Summary

void	assignFromMetaFields(harmonic.mz.data.MetaFields mf)
void	assignToMetaFields(harmonic.mz.data.MetaFields mf)
Atom	getAtom1()
Atom	getAtom2()
void	purgeFinal()

Methods inherited from class scripps.mol_data.MolElement

getMark, getMolecule, setMark, sortIndex, toString

Methods inherited from class harmonic.mz.data.SimpleNode

addField, addNode, addNodeListener, assignFromXMLAttributes, assignToXMLAttributes, at, canSelect, childCount, clearAttrib, createXMLElement, fileRoot, fromXMLNodes, getAttrib, getName, getNodeChildren, getNodeParent, getRemoteOwner, getSelect, getSerialNo, getTreeName, getTypeImage, getUpdateTime, getXMLNodes, isField, linkedTo, makeReferenced, makeUnreferenced, notifyListeners, purge, removeNode, removeNodeListener, set, setAttrib, setIsField, setName, setNodeParent, setRemoteOwner, setSelect, setSerialNo, setUpdateTime, valueString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

Bond

public Bond()

Bond

public Bond(Atom atom1,
            Atom atom2)

Method Detail

assignToMetaFields

public void assignToMetaFields(harmonic.mz.data.MetaFields mf)

assignFromMetaFields

public void assignFromMetaFields(harmonic.mz.data.MetaFields mf)

getAtom1

public Atom getAtom1()

getAtom2

public Atom getAtom2()

purgeFinal

public void purgeFinal()

Specified by:

purgeFinal in interface harmonic.mz.data.DataNode

Overrides:

purgeFinal in class harmonic.mz.data.SimpleNode